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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5697804_5700853_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5697804 - 5700853

Intron Length:

3050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TACATTACTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTTACATTACTG

Flanking Amino Acid:

VLLPDRKTCHELISCVSNDT

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.9

36.8

Major BPS

84.6

0.86

41.2

Major PPT

69.3

0.43

0.9

63.4

37.7

Minor 5ss

36.2

-1.6

2.7

42.7

38.4

Minor BPS

52.3

-0

65.3

42.6

Associated Gene:

Gene:

EGF

Ensembl Gene ID:

ENSAPLG00000011867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038561

5673983 - 5730610

56628

ENSAPLT00000012395

5673983 - 5730610

56628