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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56992120_57012882_F

Intron Information:

Intron Rank:

134999

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56992120 - 57012882

Intron Length:

20763

Sequence Information:

Terminal Dinucleotides:

GT-GC

5'SS Sequence:

TTT|GTACATTTT

5'SS Class:

weak_major

3'SS Sequence:

CCTCCTGCCTTGC|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCAAAT

U12 Branch Point Sequence:

TCAGCATCACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.2

0.24

1.1

38.8

Major BPS

62.1

0.3

1.2

67.3

37.8

Major PPT

21.4

-1.6

4.1

49.6

34.1

Minor 5ss

-0.3

3.2

71.8

39.7

Minor BPS

44.1

-0.3

2.1

62.08

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042757

56986389 - 57013793

27405