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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5700977_5702191_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5700977 - 5702191

Intron Length:

1215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTGTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

AAATTTTCAAAT

Flanking Amino Acid:

ILKVDGKTCTGCTSPDNGGC

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.9

90.9

28.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

67.7

0.4

1.1

38.8

Minor 5ss

41.2

-1

2.9

52.2

44.4

Minor BPS

50.7

0.1

1.6

65.91

38.2

Associated Gene:

Gene:

EGF

Ensembl Gene ID:

ENSAPLG00000011867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038561

5673983 - 5730610

56628

ENSAPLT00000012395

5673983 - 5730610

56628