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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5717650_5719558_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5717650 - 5719558

Intron Length:

1909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TCCTTGTGAAAT

Flanking Amino Acid:

NGASGTTMGCESTLSPTAVS

Intron Amino Acid Position:

1007

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.8

81.1

26.8

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

78.9

0.65

0.9

75.9

Minor 5ss

29.7

-2.3

2.6

30.1

36.9

Minor BPS

46.1

-0.2

2.2

65.14

45.4

Associated Gene:

Gene:

EGF

Ensembl Gene ID:

ENSAPLG00000011867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012395

5673983 - 5730610

56628

ENSAPLT00000038561

5673983 - 5730610

56628