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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57247818_57270186_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
57247818 - 57270186

Intron Length:
22369

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGTGCC

5'SS Class:
strong_major

3'SS Sequence:
TTATATCTTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATCAAAT

U12 Branch Point Sequence:
CTGGTTATATCT

Flanking Amino Acid:
AGMYSRLESQKTHLKSICLQ

Intron Amino Acid Position:
77

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.2
0.83
1
77.2
32.8

Major BPS
68.5
0.46
1
73.3
28.9

Major PPT
84.3
0.77
0.8
81.7
35.5

Minor 5ss
32.6
-2
3.4
44.1
43.8

Minor BPS
44
-0.3
1.9
59.26
44.8

Associated Gene:

Gene:
IL15

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

57216200 - 57274862
58663

57216200 - 57274748
58549