Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_57259661_57266512_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57259661 - 57266512

Intron Length:

6852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTTCCTCCAATT

Flanking Amino Acid:

ACILITCYARKLST*

Intron Amino Acid Position:

1052

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

84.6

33.2

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

87.9

0.85

0.7

80.8

31.3

Minor 5ss

42.9

-0.8

2.9

41.2

Minor BPS

0.2

1.9

78.58

37.7

Associated Gene:

Gene:

INPP4B

Ensembl Gene ID:

ENSAPLG00000008033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029393

57259646 - 57522704

263059