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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57272251_57273944_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
57272251 - 57273944

Intron Length:
1694

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAT|GTAAGTAAA

5'SS Class:
strong_major

3'SS Sequence:
TTTTTTTTTCCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TACTAAA

U12 Branch Point Sequence:
TTTTCTTTTTCT

Flanking Amino Acid:
SLYTANTDEDKECQEPIMRC

Intron Amino Acid Position:
100

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.9
0.85
0.9
85.3
25.4

Major BPS
77.5
0.68
0.8
76.2
24.6

Major PPT
98.2
1.08
0.5
92.3
26.6

Minor 5ss
37.5
-1.4
2.8
46.9
41.8

Minor BPS
48.1
-0
3.6
87.77
37.8

Associated Gene:

Gene:
IL15

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

57216200 - 57274862
58663