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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57522302_57583655_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
57522302 - 57583655

Intron Length:
61354

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATTCAT

5'SS Class:
strong_major

3'SS Sequence:
TTATGTCTCACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTCAT

U12 Branch Point Sequence:
TCATCTTTATGT

Flanking Amino Acid:
GNLLFLMKNKSSEASEVVIL

Intron Amino Acid Position:
58

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.8
0.84
0.9
79.8
35.1

Major BPS
84.8
0.86
1.1
85.7
34.9

Major PPT
78.5
0.64
0.9
72.6
37.4

Minor 5ss
36
-1.6
3
50.1
46.1

Minor BPS
54.9
0.23
1.9
72.07
45.2

Associated Gene:

Gene:
INPP4B

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

57332118 - 57624735
292618

57332118 - 57624735
292618