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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57702697_57703784_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57702697 - 57703784

Intron Length:

1088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTTA

5'SS Class:

major

3'SS Sequence:

TCTTTGCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAA

U12 Branch Point Sequence:

GTACCATTACTT

Flanking Amino Acid:

CSEYLRFLLDRLHEEEKTLK

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

69.2

Major BPS

0.2

1.2

65.3

38.6

Major PPT

84.1

0.77

0.8

81.3

30.8

Minor 5ss

38.6

-1.3

3.6

55.4

48.8

Minor BPS

49.4

0.04

1.9

68.65

41.8

Associated Gene:

Gene:

USP38

Ensembl Gene ID:

ENSAPLG00000019928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017325

57700681 - 57709750

9070