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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57703841_57703924_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

57703841 - 57703924

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGAAGA

5'SS Class:

major

3'SS Sequence:

TTGGGACGTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

ATTTGCTGAAGC

Flanking Amino Acid:

KALSSAKAPEKRTLIEKMFG

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

65.4

40.6

Major BPS

0.42

1.1

57.3

41.7

Major PPT

51.1

0.03

1.2

49.7

43.3

Minor 5ss

33.2

-1.9

3.2

39.8

40.2

Minor BPS

51.4

0.02

2.2

69.62

41.7

Associated Gene:

Gene:

USP38

Ensembl Gene ID:

ENSAPLG00000019928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017325

57700681 - 57709750

9070