Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_57831318_57837743_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57831318 - 57837743

Intron Length:

6426

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

ATCTCCTGTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATGTTTTAATC

Flanking Amino Acid:

NCQSKKPEPMRSHADSAKSS

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.5

21.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.6

0.46

0.9

35.2

Minor 5ss

42.8

-0.8

2.8

59.5

Minor BPS

61.6

0.34

1.3

64.86

35.1

Associated Gene:

Gene:

GAB1

Ensembl Gene ID:

ENSAPLG00000008645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009002

57766802 - 57861447

94646