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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57873309_57876097_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57873309 - 57876097

Intron Length:

2789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CCCTTGTCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTAAT

U12 Branch Point Sequence:

TTCCGCTTAATT

Flanking Amino Acid:

EADPTYEEKMQTDRANRFEY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

75.8

33.3

Major BPS

69.2

0.48

1.3

71.9

Major PPT

69.8

0.45

0.9

64.7

35.3

Minor 5ss

42.3

-0.9

2.5

50.7

40.4

Minor BPS

65.7

0.57

1.8

81.08

41.1

Associated Gene:

Gene:

SMARCA5

Ensembl Gene ID:

ENSAPLG00000009206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041451

57871788 - 57894587

22800

ENSAPLT00000009672

57865187 - 57893660

28474