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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57876265_57877008_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57876265 - 57877008

Intron Length:

744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGAGTGAT

5'SS Class:

major

3'SS Sequence:

TCCACTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAC

U12 Branch Point Sequence:

CTTTCTTCCACT

Flanking Amino Acid:

DEKQNLLSVGDYRHRRTEQE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

71.2

34.5

Major BPS

64.9

0.37

0.9

55.4

32.3

Major PPT

82.4

0.73

0.8

79.8

Minor 5ss

30.2

-2.3

3.2

36.5

41.7

Minor BPS

57.7

0.32

79.65

42.8

Associated Gene:

Gene:

SMARCA5

Ensembl Gene ID:

ENSAPLG00000009206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041451

57871788 - 57894587

22800

ENSAPLT00000009672

57865187 - 57893660

28474