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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57877871_57879742_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57877871 - 57879742

Intron Length:

1872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGCATG

5'SS Class:

major

3'SS Sequence:

ATGCTTTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TTTTTTCTGACA

Flanking Amino Acid:

GINGILADEMGLGKTLQTIS

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

67.1

43.8

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

77.8

0.62

0.9

72.2

37.3

Minor 5ss

49.2

-0

2.5

62.7

43.2

Minor BPS

63.5

0.42

1.6

78.39

31.4

Associated Gene:

Gene:

SMARCA5

Ensembl Gene ID:

ENSAPLG00000009206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041451

57871788 - 57894587

22800

ENSAPLT00000009672

57865187 - 57893660

28474