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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57879923_57880694_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57879923 - 57880694

Intron Length:

772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

CCTTGCTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

AAAGTCTCAATA

Flanking Amino Acid:

VCLIGDKDQRAAFVRDVLLP

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.6

33.2

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

69.2

0.43

0.9

61.3

40.1

Minor 5ss

47.4

-0.3

2.8

63.8

41.6

Minor BPS

49.2

-0

1.6

55.72

37.2

Associated Gene:

Gene:

SMARCA5

Ensembl Gene ID:

ENSAPLG00000009206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009672

57865187 - 57893660

28474

ENSAPLT00000041451

57871788 - 57894587

22800