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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57881080_57882044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57881080 - 57882044

Intron Length:

965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTGATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

ATTTTGTTGATA

Flanking Amino Acid:

LLPDVFNSSEDFDSWFDTNN

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

78.2

0.64

72.9

41.4

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

55.9

0.18

71.48

34.7

Associated Gene:

Gene:

SMARCA5

Ensembl Gene ID:

ENSAPLG00000009206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041451

57871788 - 57894587

22800

ENSAPLT00000009672

57865187 - 57893660

28474