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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57882114_57882672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57882114 - 57882672

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CAATCTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

GTTTCCAAAATA

Flanking Amino Acid:

DQKLVERLHMVLRPFLLRRI

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

77.2

0.61

0.9

73.6

36.4

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

57.4

0.23

1.9

73.11

38.8

Associated Gene:

Gene:

SMARCA5

Ensembl Gene ID:

ENSAPLG00000009206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009672

57865187 - 57893660

28474

ENSAPLT00000041451

57871788 - 57894587

22800