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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57885526_57886720_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57885526 - 57886720

Intron Length:

1195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TGTTGATTTACT

Flanking Amino Acid:

WNPQVDLQAMDRAHRIGQTK

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

80.7

31.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

83.9

0.76

0.6

78.2

30.7

Minor 5ss

38.2

-1.3

3.1

49.9

40.6

Minor BPS

0.08

2.3

78.41

43.3

Associated Gene:

Gene:

SMARCA5

Ensembl Gene ID:

ENSAPLG00000009206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041451

57871788 - 57894587

22800

ENSAPLT00000009672

57865187 - 57893660

28474