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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57886854_57887505_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57886854 - 57887505

Intron Length:

652

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTATCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATT

Flanking Amino Acid:

LRLDSIVIQQGRLVDQNLNK

Intron Amino Acid Position:

579

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.3

1.16

0.7

25.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.6

0.85

0.7

85.5

27.9

Minor 5ss

27.1

-2.6

3.8

42.5

44.3

Minor BPS

80.4

1.03

0.9

89.47

28.1

Associated Gene:

Gene:

SMARCA5

Ensembl Gene ID:

ENSAPLG00000009206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041451

57871788 - 57894587

22800

ENSAPLT00000009672

57865187 - 57893660

28474