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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57887655_57887902_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57887655 - 57887902

Intron Length:

248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATCA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

GCTCATTTCACT

Flanking Amino Acid:

DHILERGAKKTAEMNEKLSK

Intron Amino Acid Position:

629

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

27.7

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

0.54

0.8

65.4

36.2

Minor 5ss

32.8

-2

39.5

45.9

Minor BPS

48.5

-0

1.9

66.9

43.7

Associated Gene:

Gene:

SMARCA5

Ensembl Gene ID:

ENSAPLG00000009206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009672

57865187 - 57893660

28474

ENSAPLT00000041451

57871788 - 57894587

22800