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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57888363_57888905_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57888363 - 57888905

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTATGTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATGTATTT

Flanking Amino Acid:

LRVSEPKAPKAPRPPKQPNV

Intron Amino Acid Position:

706

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

80.2

30.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.1

0.7

0.9

78.2

39.7

Minor 5ss

34.1

-1.8

2.8

40.8

45.4

Minor BPS

47.7

-0

2.3

76.23

41.2

Associated Gene:

Gene:

SMARCA5

Ensembl Gene ID:

ENSAPLG00000009206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041451

57871788 - 57894587

22800

ENSAPLT00000009672

57865187 - 57893660

28474