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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57889340_57890604_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

57889340 - 57890604

Intron Length:

1265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCGCTG

5'SS Class:

major

3'SS Sequence:

AATTGCTGTAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGCTTTTAATT

Flanking Amino Acid:

LEEKEKLLTQGFTNWNKRDF

Intron Amino Acid Position:

785

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

1.2

47.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

57.6

0.17

1.2

56.4

42.9

Minor 5ss

-0.4

3.2

64.4

Minor BPS

70.5

0.72

1.2

80.41

Associated Gene:

Gene:

SMARCA5

Ensembl Gene ID:

ENSAPLG00000009206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009672

57865187 - 57893660

28474

ENSAPLT00000041451

57871788 - 57894587

22800