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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57890738_57891682_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57890738 - 57891682

Intron Length:

945

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTAC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTTTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

AATTCCATGATT

Flanking Amino Acid:

KTPEEVIEYSAVFWERCNEL

Intron Amino Acid Position:

829

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

1.1

78.4

32.4

Major BPS

73.1

0.57

71.9

31.3

Major PPT

77.5

0.62

0.8

76.4

32.2

Minor 5ss

-0.4

2.6

61.1

43.8

Minor BPS

64.6

0.54

1.6

79.5

36.1

Associated Gene:

Gene:

SMARCA5

Ensembl Gene ID:

ENSAPLG00000009206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041451

57871788 - 57894587

22800

ENSAPLT00000009672

57865187 - 57893660

28474