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Intron Name: Anas_platyrhynchos_platyrhynchos_4_57893044_57893522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57893044 - 57893522

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGTTTTGTAATT

Flanking Amino Acid:

DWFLKSRTAMELQRRCNTLI

Intron Amino Acid Position:

940

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

85.3

31.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

76.6

0.6

0.9

75.5

38.6

Minor 5ss

47.9

-0.2

2.5

65.4

40.1

Minor BPS

59.2

0.37

79.54

37.3

Associated Gene:

Gene:

SMARCA5

Ensembl Gene ID:

ENSAPLG00000009206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041451

57871788 - 57894587

22800

ENSAPLT00000009672

57865187 - 57893660

28474