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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58157057_58163507_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58157057 - 58163507

Intron Length:

6451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCGCC

5'SS Class:

major

3'SS Sequence:

TTGTGGCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

ATGTGTTTATTT

Flanking Amino Acid:

TPGLLHADTKILSVTNNTEC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

68.2

38.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

76.6

0.6

69.6

41.6

Minor 5ss

36.2

-1.6

3.5

50.4

46.4

Minor BPS

49.6

0.05

69.42

42.6

Associated Gene:

Gene:

HHIP

Ensembl Gene ID:

ENSAPLG00000009975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038965

58156790 - 58228209

71420

ENSAPLT00000010388

58156790 - 58229038

72249