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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58163704_58171027_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58163704 - 58171027

Intron Length:

7324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCCT

5'SS Class:

major

3'SS Sequence:

TTGCATTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

ACACACTAAATA

Flanking Amino Acid:

FYYTCRGHIPGFLQTTADEF

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

69.4

41.1

Major BPS

0.62

1.4

85.7

34.9

Major PPT

71.7

0.49

1.1

75.4

38.3

Minor 5ss

32.7

-2

3.4

48.4

47.3

Minor BPS

46.7

-0.2

1.8

53.05

39.1

Associated Gene:

Gene:

HHIP

Ensembl Gene ID:

ENSAPLG00000009975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038965

58156790 - 58228209

71420

ENSAPLT00000010388

58156790 - 58229038

72249