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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58171977_58208430_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58171977 - 58208430

Intron Length:

36454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGAATT

5'SS Class:

major

3'SS Sequence:

CATTTGACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTCATTTGACT

Flanking Amino Acid:

IHKLVQSGIKGGDERGLLSL

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.2

76.6

38.6

Major BPS

100

1.24

0.5

100

Major PPT

73.9

0.54

0.9

66.7

Minor 5ss

34.4

-1.8

3.3

49.3

46.6

Minor BPS

68.1

0.65

1.5

85.84

33.6

Associated Gene:

Gene:

HHIP

Ensembl Gene ID:

ENSAPLG00000009975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038965

58156790 - 58228209

71420

ENSAPLT00000010388

58156790 - 58229038

72249