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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58208583_58209022_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

58208583 - 58209022

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCATTA

5'SS Class:

weak_major

3'SS Sequence:

CTTTGTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GTTTTCATATCT

Flanking Amino Acid:

ILRVVEYTVSRKNPHQVDMR

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.2

70.4

36.4

Major BPS

100

1.24

0.5

100

Major PPT

83.3

0.75

0.9

77.5

35.5

Minor 5ss

61.1

0.37

2.4

73.7

42.9

Minor BPS

59.2

0.37

1.9

81.49

39.8

Associated Gene:

Gene:

HHIP

Ensembl Gene ID:

ENSAPLG00000009975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038965

58156790 - 58228209

71420

ENSAPLT00000010388

58156790 - 58229038

72249