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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58211454_58213511_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58211454 - 58213511

Intron Length:

2058

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

AGTTCCTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TATGATCTAATG

Flanking Amino Acid:

ILQIIKGKDYESEPSLLEFK

Intron Amino Acid Position:

472

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

77.6

31.4

Major BPS

85.7

0.89

0.8

22.2

Major PPT

77.2

0.61

0.8

74.3

35.8

Minor 5ss

41.6

-0.9

2.7

39.8

Minor BPS

46.1

-0.4

1.9

53.96

41.3

Associated Gene:

Gene:

HHIP

Ensembl Gene ID:

ENSAPLG00000009975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038965

58156790 - 58228209

71420

ENSAPLT00000010388

58156790 - 58229038

72249