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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58213636_58214328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58213636 - 58214328

Intron Length:

693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTTTC

5'SS Class:

major

3'SS Sequence:

TTTTTGATTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GTATTTTTGATT

Flanking Amino Acid:

YGSYVFGDRNGNFLTLQQNP

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

1.1

73.2

39.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

82.6

0.73

0.8

77.6

35.5

Minor 5ss

42.9

-0.8

3.1

52.3

Minor BPS

65.3

0.56

1.1

75.41

35.5

Associated Gene:

Gene:

HHIP

Ensembl Gene ID:

ENSAPLG00000009975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038965

58156790 - 58228209

71420

ENSAPLT00000010388

58156790 - 58229038

72249