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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58215138_58225379_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58215138 - 58225379

Intron Length:

10242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATATTTTTATAC

Flanking Amino Acid:

GKLYKIIDPKRPLVPEECKR

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

86.9

30.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.3

0.79

0.9

80.9

35.5

Minor 5ss

39.9

-1.1

3.1

56.9

47.4

Minor BPS

51.7

0.03

1.6

62.32

36.9

Associated Gene:

Gene:

HHIP

Ensembl Gene ID:

ENSAPLG00000009975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038965

58156790 - 58228209

71420

ENSAPLT00000010388

58156790 - 58229038

72249