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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58228145_58229027_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

58228145 - 58229027

Intron Length:

883

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCTTG

5'SS Class:

weak_major

3'SS Sequence:

TTTTATAATATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTATAATA

Flanking Amino Acid:

DRNIRRVTRADIT*

Intron Amino Acid Position:

677

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

64.2

42.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.7

0.58

0.9

38.6

Minor 5ss

62.7

0.43

2.2

73.2

43.6

Minor BPS

0.4

1.5

73.94

31.3

Associated Gene:

Gene:

HHIP

Ensembl Gene ID:

ENSAPLG00000009975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010388

58156790 - 58229038

72249