Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_58324244_58324751_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58324244 - 58324751

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGCC

5'SS Class:

strong_major

3'SS Sequence:

GTTTCAATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TAATCCATAAAT

Flanking Amino Acid:

LCIGCGICIKKCPFGALSIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

69.3

33.7

Major BPS

76.9

0.67

1.2

31.9

Major PPT

77.9

0.63

0.9

70.4

39.1

Minor 5ss

-2.2

3.4

42.5

44.5

Minor BPS

64.9

0.55

1.7

81.2

39.2

Associated Gene:

Gene:

ABCE1

Ensembl Gene ID:

ENSAPLG00000010315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010834

58323380 - 58334912

11533

ENSAPLT00000010167

58323380 - 58447579

124200