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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58324850_58325220_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
58324850 - 58325220

Intron Length:
371

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATTTTGT

5'SS Class:
major

3'SS Sequence:
ATATTGCATACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATATAAT

U12 Branch Point Sequence:
ATAATCTGAAGT

Flanking Amino Acid:
RYCANAFKLHRLPIPRPGEV

Intron Amino Acid Position:
96

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.1
0.66
1
73.3
38.2

Major BPS
79
0.72
1
78.4
31.2

Major PPT
69.7
0.44
1
62.6
42.8

Minor 5ss
48.1
-0.2
2.5
67.9
42.9

Minor BPS
50.1
0.08
1.8
68.81
41.6

Associated Gene:

Gene:
ABCE1

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

58323380 - 58447579
124200

58323380 - 58334912
11533