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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58330174_58330536_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
58330174 - 58330536

Intron Length:
363

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAATATA

5'SS Class:
strong_major

3'SS Sequence:
CTGTATTTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTCAA

U12 Branch Point Sequence:
AAATCTCTGACT

Flanking Amino Acid:
ITIRSLINPDRYIIVVEHDL

Intron Amino Acid Position:
267

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.6
0.93
0.8
89.5
23.2

Major BPS
75.6
0.64
1.1
77.7
37.1

Major PPT
83.1
0.74
0.9
80.5
36.7

Minor 5ss
38.7
-1.3
2.9
50.9
45.5

Minor BPS
56.6
0.29
1.6
71.94
38.5

Associated Gene:

Gene:
ABCE1

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

58323380 - 58334912
11533

58323380 - 58447579
124200