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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58345317_58346249_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

58345317 - 58346249

Intron Length:

933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTATGCTTT

5'SS Class:

weak_minor

3'SS Sequence:

TCAACTTCTTTAG|A

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

CTTTTGTCAACT

Flanking Amino Acid:

DEQAFPALSNNQSVCQAAAQ

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

73.5

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

72.5

0.51

0.9

36.1

Minor 5ss

0.98

86.2

30.1

Minor BPS

54.6

0.22

2.3

79.4

Associated Gene:

Gene:

OTUD4

Ensembl Gene ID:

ENSAPLG00000011619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012137

58336375 - 58364036

27662