Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_58361224_58362727_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

58361224 - 58362727

Intron Length:

1504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

CTTTCTTTGATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

1.1

76.2

39.9

Major BPS

0.85

0.9

39.9

Major PPT

75.1

0.56

0.9

69.3

36.9

Minor 5ss

-1.1

3.3

58.7

45.8

Minor BPS

76.9

0.93

1.1

86.34

34.1

Associated Gene:

Gene:

OTUD4

Ensembl Gene ID:

ENSAPLG00000011619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012137

58336375 - 58364036

27662