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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58493346_58493801_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58493346 - 58493801

Intron Length:

456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTAATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATTGCCATAAAT

Flanking Amino Acid:

GYDVVLVETVGVGQSEFAVA

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

80.6

31.9

Major BPS

81.8

0.79

1.1

34.5

Major PPT

87.3

0.84

0.8

84.9

35.2

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

60.8

0.42

1.8

40.1

Associated Gene:

Gene:

MMAA

Ensembl Gene ID:

ENSAPLG00000012279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012793

58490112 - 58495868

5757