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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58529972_58531481_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58529972 - 58531481

Intron Length:

1510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

TATACATTGAAA

Flanking Amino Acid:

TLSRHLSLHTEERKYKCHLC

Intron Amino Acid Position:

832

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

74.9

0.62

81.3

29.9

Major PPT

85.9

0.81

0.7

84.4

30.5

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

52.7

0.08

1.8

38.4

Associated Gene:

Gene:

ZNF827

Ensembl Gene ID:

ENSAPLG00000012322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012839

58523709 - 58621659

97951

ENSAPLT00000042992

58518229 - 58621659

103431