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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58556447_58570436_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58556447 - 58570436

Intron Length:

13990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGATATT

5'SS Class:

strong_major

3'SS Sequence:

TATGTATTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATA

Flanking Amino Acid:

AASELLMKLSAESYKETQMV

Intron Amino Acid Position:

649

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

84.2

33.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.5

0.69

0.9

40.3

Minor 5ss

39.6

-1.2

3.3

59.2

45.4

Minor BPS

77.8

0.87

80.84

27.9

Associated Gene:

Gene:

ZNF827

Ensembl Gene ID:

ENSAPLG00000012322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042992

58518229 - 58621659

103431

ENSAPLT00000012839

58523709 - 58621659

97951