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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58596872_58621616_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58596872 - 58621616

Intron Length:

24745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

TGGTTCCACGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTAAT

U12 Branch Point Sequence:

TTGGGAGTAATA

Flanking Amino Acid:

KQEQPKRLSSHGTRQEEVEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.3

74.6

37.4

Major BPS

58.9

0.22

1.4

61.7

43.1

Major PPT

68.3

0.41

62.7

38.7

Minor 5ss

35.3

-1.7

3.2

44.3

36.5

Minor BPS

40.5

-0.7

2.5

55.55

44.2

Associated Gene:

Gene:

ZNF827

Ensembl Gene ID:

ENSAPLG00000012322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042992

58518229 - 58621659

103431

ENSAPLT00000012839

58523709 - 58621659

97951