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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58691619_58692340_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

58691619 - 58692340

Intron Length:

722

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCACCAAGA

5'SS Class:

weak_major

3'SS Sequence:

AAACAAAGCAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTTGAAACAAAC

Flanking Amino Acid:

AQQGLNTTSAESRFLFLVCF

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.3

52.2

43.9

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

43.9

-0.3

1.1

31.2

33.5

Minor 5ss

27.1

-2.6

37.5

41.8

Minor BPS

-0.8

2.1

55.7

41.5

Associated Gene:

Gene:

REELD1

Ensembl Gene ID:

ENSAPLG00000012613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013126

58688103 - 58696138

8036