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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58692707_58695671_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

58692707 - 58695671

Intron Length:

2965

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACT|GCACGGACA

5'SS Class:

weak_major

3'SS Sequence:

CTTGGTGAGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

GCTGTGATGACA

Flanking Amino Acid:

TSSQSPSDGYYTTSNLSLAS

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.4

0.1

1.5

59.4

39.3

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

58.5

0.19

1.2

Minor 5ss

24.1

-3

4.1

41.1

45.1

Minor BPS

40.9

-0.7

2.2

50.98

40.8

Associated Gene:

Gene:

REELD1

Ensembl Gene ID:

ENSAPLG00000012613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013126

58688103 - 58696138

8036