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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58940585_58945359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58940585 - 58945359

Intron Length:

4775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTGCTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

GAATAAATAATT

Flanking Amino Acid:

AYEMIAKILVSQGKVAETLT

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

74.9

38.1

Major BPS

71.2

0.53

70.3

31.9

Major PPT

74.9

0.56

0.8

73.1

31.9

Minor 5ss

38.1

-1.3

3.1

48.2

47.9

Minor BPS

45.5

-0.2

62.88

40.2

Associated Gene:

Gene:

TTC29

Ensembl Gene ID:

ENSAPLG00000012616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026429

58890129 - 59162993

272865

ENSAPLT00000017621

58890129 - 59011658

121530

ENSAPLT00000013129

58899006 - 59011785

112780

ENSAPLT00000048435

58890129 - 59011785

121657