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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58961072_58961968_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58961072 - 58961968

Intron Length:

897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTA

5'SS Class:

strong_major

3'SS Sequence:

ATCTATTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAA

U12 Branch Point Sequence:

GTGACTGTAACT

Flanking Amino Acid:

LRKAFIMTKAGGDKKMEGEA

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.5

32.7

Major BPS

69.4

0.48

71.6

33.8

Major PPT

80.7

0.69

0.8

77.7

35.8

Minor 5ss

34.9

-1.7

3.5

48.5

47.7

Minor BPS

53.5

0.19

2.1

73.14

43.8

Associated Gene:

Gene:

TTC29

Ensembl Gene ID:

ENSAPLG00000012616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026429

58890129 - 59162993

272865

ENSAPLT00000017621

58890129 - 59011658

121530

ENSAPLT00000013129

58899006 - 59011785

112780

ENSAPLT00000048435

58890129 - 59011785

121657