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Intron Name: Anas_platyrhynchos_platyrhynchos_4_58962182_58980209_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58962182 - 58980209

Intron Length:

18028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TCACATTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TAATTATGAATC

Flanking Amino Acid:

AHAGLISEEQGHVMKAAEHY

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.6

1.05

0.7

81.4

32.7

Major BPS

84.4

0.85

1.1

34.5

Major PPT

79.6

0.67

0.9

76.6

36.9

Minor 5ss

34.5

-1.8

2.9

43.8

43.9

Minor BPS

51.1

0.01

1.7

62.54

36.2

Associated Gene:

Gene:

TTC29

Ensembl Gene ID:

ENSAPLG00000012616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026429

58890129 - 59162993

272865

ENSAPLT00000017621

58890129 - 59011658

121530

ENSAPLT00000013129

58899006 - 59011785

112780

ENSAPLT00000048435

58890129 - 59011785

121657