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Intron Name: Anas_platyrhynchos_platyrhynchos_4_59005406_59009268_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59005406 - 59009268

Intron Length:

3863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CATTTAAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTTTTAATT

Flanking Amino Acid:

QTICPPLDFARIHLIKDKDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

33.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.3

0.39

64.6

40.4

Minor 5ss

-1.1

53.2

44.1

Minor BPS

77.3

0.94

88.63

29.6

Associated Gene:

Gene:

TTC29

Ensembl Gene ID:

ENSAPLG00000012616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026429

58890129 - 59162993

272865

ENSAPLT00000017621

58890129 - 59011658

121530