Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_59005406_59011648_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59005406 - 59011648

Intron Length:

6243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCCGTTCC

5'SS Class:

major

3'SS Sequence:

CATTTAAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTTTTAATT

Flanking Amino Acid:

GNRRAPRHEERIHLIKDKDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.3

66.9

39.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.3

0.39

64.6

40.4

Minor 5ss

35.8

-1.6

2.9

45.7

42.4

Minor BPS

77.3

0.94

88.63

29.6

Associated Gene:

Gene:

TTC29

Ensembl Gene ID:

ENSAPLG00000012616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048435

58890129 - 59011785

121657

ENSAPLT00000013129

58899006 - 59011785

112780