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Intron Name: Anas_platyrhynchos_platyrhynchos_4_59080140_59162887_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

59080140 - 59162887

Intron Length:

82748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTCAT

U12 Branch Point Sequence:

GAACCCTGAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

81.9

32.3

Major BPS

74.4

0.61

1.2

77.7

37.1

Major PPT

91.7

0.94

0.5

92.2

18.3

Minor 5ss

44.4

-0.6

3.2

66.3

44.6

Minor BPS

51.9

0.05

1.6

59.12

Associated Gene:

Gene:

TTC29

Ensembl Gene ID:

ENSAPLG00000012616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026429

58890129 - 59162993

272865