Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_5910907_5911532_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5910907 - 5911532

Intron Length:

626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGATAAATTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TGTTGATAAATT

Flanking Amino Acid:

AVIAHELVHQWFGNIVTMDW

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

88.1

28.7

Major BPS

76.9

0.67

1.2

31.9

Major PPT

0.4

1.1

59.3

44.8

Minor 5ss

45.1

-0.5

3.1

44.3

Minor BPS

48.2

-0

2.3

73.64

43.4

Associated Gene:

Gene:

ENPEP

Ensembl Gene ID:

ENSAPLG00000012392

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012977

5896279 - 5929112

32834

ENSAPLT00000045830

5895021 - 5929112

34092